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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11250003 chr8:10262695 C/T PPP2CB chr8:30631973-30671830:- -0.59 -7.22 2.77E-12 Box Plot
BLCA rs11250003 chr8:10262695 C/T TRIM35 chr8:27142404-27168836:- -0.54 -6.16 1.89E-9 Box Plot
BLCA rs11250003 chr8:10262695 C/T VPS37A chr8:17104080-17159936:+ -0.61 -6.98 1.3E-11 Box Plot
BLCA rs11250003 chr8:10262695 C/T WRN chr8:30891317-31031285:+ -0.55 -7.03 9.25E-12 Box Plot
BLCA rs11250003 chr8:10262695 C/T XPO7 chr8:21777182-21864096:+ -0.56 -6.1 2.54E-9 Box Plot
BLCA rs11253023 chr10:575042 T/C SERF2 chr15:44069285-44094787:+ -0.43 -6.06 3.32E-9 Box Plot
BLCA rs11254250 chr10:16897973 C/T RAB1B chr11:66036004-66044963:+ 0.8 6.36 5.83E-10 Box Plot
BLCA rs11264133 chr1:35771092 G/A KRTAP13-1 chr21:31768392-31769140:+ 0.2 6.79 4.17E-11 Box Plot
BLCA rs11264135 chr1:35774283 G/A KRTAP13-1 chr21:31768392-31769140:+ 0.2 6.76 5.07E-11 Box Plot
BLCA rs11264137 chr1:35799591 A/T KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.93E-10 Box Plot
BLCA rs11264140 chr1:35809999 A/G KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.39 4.93E-10 Box Plot
BLCA rs11265840 chr9:92227349 A/G ALG2 chr9:101978708-101984238:- 0.66 5.99 4.76E-9 Box Plot
BLCA rs11265840 chr9:92227349 A/G SEC61B chr9:101984346-101992897:+ 0.45 5.97 5.31E-9 Box Plot
BLCA rs11265840 chr9:92227349 A/G SPIN1 chr9:91003334-91093609:+ 0.56 6.37 5.42E-10 Box Plot
BLCA rs11265840 chr9:92227349 A/G ZNF510 chr9:99518147-99540411:- 0.57 6.39 4.77E-10 Box Plot